CDS

Accession Number TCMCG057C38317
gbkey CDS
Protein Id XP_018446216.1
Location join(744240..744406,744501..744620,744732..744862,744961..745689,745858..745996,746089..746143,746233..746253,746377..746430,746559..746678,746756..746862,747020..747170)
Gene LOC108817886
GeneID 108817886
Organism Raphanus sativus

Protein

Length 597aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018590714.1
Definition PREDICTED: suppressor protein SRP40-like isoform X3 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category K
Description transcription factor-like protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03000        [VIEW IN KEGG]
KEGG_ko ko:K04683        [VIEW IN KEGG]
ko:K09392        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04110        [VIEW IN KEGG]
ko04350        [VIEW IN KEGG]
map04110        [VIEW IN KEGG]
map04350        [VIEW IN KEGG]
GOs GO:0000082        [VIEW IN EMBL-EBI]
GO:0000278        [VIEW IN EMBL-EBI]
GO:0000981        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003700        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006260        [VIEW IN EMBL-EBI]
GO:0006261        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0042023        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044770        [VIEW IN EMBL-EBI]
GO:0044772        [VIEW IN EMBL-EBI]
GO:0044786        [VIEW IN EMBL-EBI]
GO:0044843        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046982        [VIEW IN EMBL-EBI]
GO:0046983        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1903047        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGACTTTGTCTTTCTTCTCTTCTTTGGCTTCCTTACACAATCGGAATCCAATGTTCTACCATCAGCAGCCGCAACTTCCTTTTGTTCCCCACTTGAATAACTTGAAGAAGAAGAAGAAGAAGAACGCTTTCATATGTTTCGCTTGTTCCACCAAACAAACCAGAGTTCGTAAGAGAGTGAAGAGCAACGAGGAGCTACGTAATGAGATTCTGGAGTTCGTTGCTTTGGCTGGGCTTCCTCCAGGTCACGTCCCCTCCATGAAGGAACTCTCTGCTCATCAAAGAGTTGATCTTGCCAACGTTGTAAGACGAAGAGGATATAAGTTCATCAGGGAGCTTCTTTCCAACTCTGAGACTGAAGACTGTACTGAGCTTACAAGTCCAAGTGGCATCTCTTTAGAAGACTCGTTAACAGAAGAAGGTCAGGACGAAGAAGCACTTGACGGAAGCTTGCCTACTGAAGAACGACCTTCAAGCACCGACATATACTCTAATGCAACAGATGCTAGTGTCTCTCTTGATCGTATAACAAATAGTTTTCCAGAGGAAGTTGATGAAGCGTACTCAAGTCCCGAGGATGATGAATGTGTAAGTGTCAGTAATGATGAATCTTCATTGGCTGCACTTTCGAGTATGGAAAGCTCCATTCCAGACTTGGATGACAGTAACCACTCAGCAGATATCACAGAAAGTAAATCAAAGATTGAGAGCGTGGAGCTCAGTAATGTAGCTGACACTGAATCCTCCTCATCTTCAGTATCCGATTTAGATTATACTTCAAGCTCTTCAGAGAGAGAAGCTGACAATGTTTTGGTGACAGAGGAGGATGAGGAGGTCAACGATGTGGAAGATGATTCCTCTCTTCTTAGCTATGATCATTACACCAGTCAAGATCTCAATCACACCACCAAAAACGTTGTTGAAAGTGTTGCTACTGAATCCTTGTCTGGTGAGAACACCATGGCAAATGCAGAGAATTTTCAGAATCAGCAGATTGATCATATGGCTGAAAAGCGTTCTGACGATATTTTAGTTGAGCCTGATGATAAAGATTGGATGTTAGGACTTCCTTCTTCAACTTCAAGCATAGAAGAAAAAACAACCAGATTTATCCAGAACGGATACTTGGATACAGTTGATGATGATGATGAAAATGACAGACTGAATGAAGAAACAAACAAAGGTGGTGAGTACAGTCAGAGAAGTGTGAGTATGGCGCCAAATGGAAGCGCCCTAGCATATGAGGAGGTTACCCATGCGACACAAGTTAATAACTCTAAAAGGAATAGTGATCAAAGACATGGGAATGCTGAACTGGACAAGGATTCACATGATGAGGACATGAAACGGGAAAATCAGCGTCAAAAAGAGCTGGAGCTGTCAAGGTTAAAAGAGCAGATTGAAAAGGAAAAGCTGTCTCTATCGGTTCTTCAAAGAAAAGCTGAAACAGAGATACAAAAGGCCCAAATGCTCGTCTCACAGAAGGATGTTGAGTTGCAAGAAGCTGAGGAAAGTCTCTCAGGATTGCAAGAGGTTGAGATTGAATATTGCGGGGATGGTAATGTTGTGGAGGTGACTGGCAGCTTCAATGGCTGGGAGCACCGAGTGGGACTGGAGCTTGAAACATCCAAGTCAACCGGGAAACAGAAATGCTGGTCAACATTACTGTGGTTGTATCCTGGTACATATGAGATTAAATTCATCGTGGACGGTCAATGGATAACTGACCCTCGAAGAGATTCAGTTACAAGAGGACACGTCACAAACAACATTCTCAAAGTAGACAGATGA
Protein:  
MATLSFFSSLASLHNRNPMFYHQQPQLPFVPHLNNLKKKKKKNAFICFACSTKQTRVRKRVKSNEELRNEILEFVALAGLPPGHVPSMKELSAHQRVDLANVVRRRGYKFIRELLSNSETEDCTELTSPSGISLEDSLTEEGQDEEALDGSLPTEERPSSTDIYSNATDASVSLDRITNSFPEEVDEAYSSPEDDECVSVSNDESSLAALSSMESSIPDLDDSNHSADITESKSKIESVELSNVADTESSSSSVSDLDYTSSSSEREADNVLVTEEDEEVNDVEDDSSLLSYDHYTSQDLNHTTKNVVESVATESLSGENTMANAENFQNQQIDHMAEKRSDDILVEPDDKDWMLGLPSSTSSIEEKTTRFIQNGYLDTVDDDDENDRLNEETNKGGEYSQRSVSMAPNGSALAYEEVTHATQVNNSKRNSDQRHGNAELDKDSHDEDMKRENQRQKELELSRLKEQIEKEKLSLSVLQRKAETEIQKAQMLVSQKDVELQEAEESLSGLQEVEIEYCGDGNVVEVTGSFNGWEHRVGLELETSKSTGKQKCWSTLLWLYPGTYEIKFIVDGQWITDPRRDSVTRGHVTNNILKVDR